scRNAseq

DOI: 10.18129/B9.bioc.scRNAseq    

A Collection of Public Single-Cell RNA-Seq Datasets

Bioconductor version: Release (3.6)

Gene-level read counts of three public scRNA-seq datasets. See vignette for details.

Author: Davide Risso [aut, cre, cph], Michael Cole [aut]

Maintainer: Davide Risso <risso.davide at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("scRNAseq")

Documentation

HTML	R Script	scRNAseq
PDF		Reference Manual

Details

biocViews	ExperimentData, ExpressionData, RNASeqData, SequencingData
Version	1.4.0
License	CC0
Depends	R (>= 3.3), SummarizedExperiment
Imports
LinkingTo
Suggests	BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	clusterExperiment, scone, SingleCellExperiment, zinbwave
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	scRNAseq_1.4.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/scRNAseq
Package Short Url	http://bioconductor.org/packages/scRNAseq/
Package Downloads Report	Download Stats