minionSummaryData

DOI: 10.18129/B9.bioc.minionSummaryData    

Summarised MinION sequencing data published by Ashton et al. 2015

Bioconductor version: Release (3.6)

Summarised MinION sequencing data for Salmonella Typhi published by Ashton et al. in 2015. Three replicate runs are each provided as Fast5Summary objects.

Author: Mike Smith [aut, cre]

Maintainer: Mike Smith <grimbough at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("minionSummaryData")

Documentation

HTML	R Script	Creating example MinION summary dataset
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	ExperimentData, SequencingData
Version	1.8.0
License	MIT + file LICENSE
Depends	R (>= 3.2.0)
Imports
LinkingTo
Suggests	BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	IONiseR
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	minionSummaryData_1.8.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/minionSummaryData
Package Short Url	http://bioconductor.org/packages/minionSummaryData/
Package Downloads Report	Download Stats