RIPSeekerData

DOI: 10.18129/B9.bioc.RIPSeekerData    

test data for RIPSeeker

Bioconductor version: Release (3.6)

The RIP-seq data in BAM format are the test data for the package RIPSeeker. The data correspond to two RIP-seq experiments, namely PRC2 and CCNT1. Raw data from NCBI Gene Expression Omnibus under accession numbers GSE17064 for PRC2 and in-house for CCNT1.

Author: Yue Li

Maintainer: Alejandro Reyes <reyes at embl.de>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RIPSeekerData")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RIPSeekerData")

 

PDF	R Script	RIP-seq datasets for testing RIPSeeker package
PDF		Reference Manual

Details

biocViews	ExperimentData, GEO, Genome, RIPSeqData, SequencingData, StemCell
Version	1.14.0
License	GPL-2
Depends	RIPSeeker
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	RIPSeekerData_1.14.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/RIPSeekerData
Package Short Url	http://bioconductor.org/packages/RIPSeekerData/
Package Downloads Report	Download Stats