KEGGdzPathwaysGEO

DOI: 10.18129/B9.bioc.KEGGdzPathwaysGEO    

KEGG Disease Datasets from GEO

Bioconductor version: Release (3.6)

This is a collection of 24 data sets for which the phenotype is a disease with a corresponding pathway in the KEGG database.This collection of datasets were used as gold standard in comparing gene set analysis methods by the PADOG package.

Author: Gaurav Bhatti, Adi L. Tarca

Maintainer: Gaurav Bhatti <gbhatti at med.wayne.edu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("KEGGdzPathwaysGEO")

Documentation

PDF		Reference Manual

Details

biocViews	ExperimentData, GEO, MicroarrayData
Version	1.16.0
License	GPL-2
Depends	R (>= 2.13.0)
Imports	Biobase, BiocGenerics
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me	PADOG
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	KEGGdzPathwaysGEO_1.16.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/KEGGdzPathwaysGEO
Package Short Url	http://bioconductor.org/packages/KEGGdzPathwaysGEO/
Package Downloads Report	Download Stats