flowVS

DOI: 10.18129/B9.bioc.flowVS    

Variance stabilization in flow cytometry (and microarrays)

Bioconductor version: Release (3.6)

Per-channel variance stabilization from a collection of flow cytometry samples by Bertlett test for homogeneity of variances. The approach is applicable to microarrays data as well.

Author: Ariful Azad

Maintainer: Ariful Azad <azadcse at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowVS")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowVS")

 

PDF	R Script	flowVS: Cell population matching and meta-clustering in Flow Cytometry
PDF		Reference Manual

Details

biocViews	CellBasedAssays, FlowCytometry, Microarray, Software
Version	1.10.0
In Bioconductor since	BioC 3.1 (R-3.2) (3 years)
License	Artistic-2.0
Depends	R (>= 3.2), methods, flowCore, flowViz, flowStats
Imports
LinkingTo
Suggests	knitr, vsn
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowVS_1.10.0.tar.gz
Windows Binary	flowVS_1.10.0.zip
Mac OS X 10.11 (El Capitan)	flowVS_1.10.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowVS
Package Short Url	http://bioconductor.org/packages/flowVS/
Package Downloads Report	Download Stats