flowPeaks

DOI: 10.18129/B9.bioc.flowPeaks    

An R package for flow data clustering

Bioconductor version: Release (3.6)

A fast and automatic clustering to classify the cells into subpopulations based on finding the peaks from the overall density function generated by K-means.

Author: Yongchao Ge<yongchao.ge at gmail.com>

Maintainer: Yongchao Ge<yongchao.ge at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowPeaks")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowPeaks")

 

PDF	R Script	Tutorial of flowPeaks package
PDF		Reference Manual
Text		README

Details

biocViews	Clustering, FlowCytometry, Gating, Software
Version	1.22.0
In Bioconductor since	BioC 2.11 (R-2.15) (5.5 years)
License	Artistic-1.0
Depends	R (>= 2.12.0)
Imports
LinkingTo
Suggests
SystemRequirements	gsl
Enhances	flowCore
URL
Depends On Me
Imports Me	CONFESS
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowPeaks_1.22.0.tar.gz
Windows Binary	flowPeaks_1.22.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	flowPeaks_1.22.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowPeaks
Package Short Url	http://bioconductor.org/packages/flowPeaks/
Package Downloads Report	Download Stats