dupRadar

DOI: 10.18129/B9.bioc.dupRadar    

Assessment of duplication rates in RNA-Seq datasets

Bioconductor version: Release (3.6)

Duplication rate quality control for RNA-Seq datasets.

Author: Sergi Sayols <sergisayolspuig at gmail.com>, Holger Klein <holger.klein at gmail.com>

Maintainer: Sergi Sayols <sergisayolspuig at gmail.com>, Holger Klein <holger.klein at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dupRadar")

Documentation

HTML	R Script	Using dupRadar
PDF		Reference Manual
Text		NEWS

Details

biocViews	QualityControl, RNASeq, Sequencing, Software, Technology
Version	1.8.0
In Bioconductor since	BioC 3.2 (R-3.2) (2.5 years)
License	GPL-3
Depends	R (>= 3.2.0)
Imports	Rsubread(>= 1.14.1)
LinkingTo
Suggests	BiocStyle, knitr, rmarkdown, AnnotationHub
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	dupRadar_1.8.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)	dupRadar_1.8.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/dupRadar
Package Short Url	http://bioconductor.org/packages/dupRadar/
Package Downloads Report	Download Stats