RPA

DOI: 10.18129/B9.bioc.RPA    

RPA: Robust Probabilistic Averaging for probe-level analysis

Bioconductor version: Release (3.6)

Probabilistic analysis of probe reliability and differential gene expression on short oligonucleotide arrays. Lahti et al. "Probabilistic Analysis of Probe Reliability in Differential Gene Expression Studies with Short Oligonucleotide Arrays", TCBB/IEEE, 2011. http://doi.ieeecomputersociety.org/10.1109/TCBB.2009.38

Author: Leo Lahti <leo.lahti at iki.fi>

Maintainer: Leo Lahti <leo.lahti at iki.fi>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RPA")

Documentation

PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	GeneExpression, Microarray, Preprocessing, QualityControl, Software
Version	1.34.0
In Bioconductor since	BioC 2.5 (R-2.10) (8.5 years)
License	BSD_2_clause + file LICENSE
Depends	R (>= 3.1.1), affy, BiocGenerics, methods, phyloseq
Imports
LinkingTo
Suggests	affydata, parallel
SystemRequirements
Enhances
URL	https://github.com/antagomir/RPA
BugReports	https://github.com/antagomir/RPA
Depends On Me	prebs
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	RPA_1.34.0.tar.gz
Windows Binary	RPA_1.34.0.zip
Mac OS X 10.11 (El Capitan)	RPA_1.34.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/RPA
Package Short Url	http://bioconductor.org/packages/RPA/
Package Downloads Report	Download Stats