PREDA

DOI: 10.18129/B9.bioc.PREDA    

Position Related Data Analysis

Bioconductor version: Release (3.6)

Package for the position related analysis of quantitative functional genomics data.

Author: Francesco Ferrari <francesco.ferrari at ifom.eu>

Maintainer: Francesco Ferrari <francesco.ferrari at ifom.eu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("PREDA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PREDA")

 

PDF		PREDA S4-classes
PDF	R Script	PREDA tutorial
PDF		Reference Manual

Details

biocViews	CopyNumberVariation, GeneExpression, Genetics, Software
Version	1.24.0
In Bioconductor since	BioC 2.9 (R-2.14) (6.5 years)
License	GPL-2
Depends	R (>= 2.9.0), Biobase, lokern (>= 1.0.9), multtest, stats, methods, annotate
Imports
LinkingTo
Suggests	quantsmooth, qvalue, samr, limma, caTools, affy, PREDAsampledata
SystemRequirements
Enhances	Rmpi, rsprng
URL
Depends On Me	PREDAsampledata
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	PREDA_1.24.0.tar.gz
Windows Binary	PREDA_1.24.0.zip
Mac OS X 10.11 (El Capitan)	PREDA_1.24.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/PREDA
Package Short Url	http://bioconductor.org/packages/PREDA/
Package Downloads Report	Download Stats