PREDA

DOI: 10.18129/B9.bioc.PREDA    

Position Related Data Analysis

Bioconductor version: Release (3.6)

Package for the position related analysis of quantitative functional genomics data.

Author: Francesco Ferrari <francesco.ferrari at ifom.eu>

Maintainer: Francesco Ferrari <francesco.ferrari at ifom.eu>

Citation (from within R, enter citation("PREDA")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("PREDA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PREDA")

 

PDF PREDA S4-classes
PDF R Script PREDA tutorial
PDF   Reference Manual

Details

biocViews CopyNumberVariation, GeneExpression, Genetics, Software
Version 1.24.0
In Bioconductor since BioC 2.9 (R-2.14) (6.5 years)
License GPL-2
Depends R (>= 2.9.0), Biobase, lokern (>= 1.0.9), multtest, stats, methods, annotate
Imports
LinkingTo
Suggests quantsmooth, qvalue, samr, limma, caTools, affy, PREDAsampledata
SystemRequirements
Enhances Rmpi, rsprng
URL
Depends On Me PREDAsampledata
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package PREDA_1.24.0.tar.gz
Windows Binary PREDA_1.24.0.zip
Mac OS X 10.11 (El Capitan) PREDA_1.24.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/PREDA
Package Short Url http://bioconductor.org/packages/PREDA/
Package Downloads Report Download Stats

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