MetaCyto

DOI: 10.18129/B9.bioc.MetaCyto    

MetaCyto: A package for meta-analysis of cytometry data

Bioconductor version: Release (3.6)

This package provides functions for preprocessing, automated gating and meta-analysis of cytometry data. It also provides functions that facilitate the collection of cytometry data from the ImmPort database.

Author: Zicheng Hu, Chethan Jujjavarapu, Sanchita Bhattacharya, Atul J. Butte

Maintainer: Zicheng Hu <zicheng.hu at ucsf.edu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MetaCyto")

Documentation

HTML	R Script	Vignette Title
PDF		Reference Manual

Details

biocViews	CellBasedAssays, CellBiology, Clustering, FlowCytometry, Preprocessing, Software, StatisticalMethod
Version	1.4.0
License	GPL (>= 2)
Depends	R (>= 3.4)
Imports	flowCore(>= 1.4), tidyr (>= 0.7), fastcluster, ggplot2, metafor, cluster, FlowSOM, grDevices, graphics, stats, utils
LinkingTo
Suggests	knitr, dplyr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MetaCyto_1.4.0.tar.gz
Windows Binary	MetaCyto_1.4.0.zip
Mac OS X 10.11 (El Capitan)	MetaCyto_1.4.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MetaCyto
Package Short Url	http://bioconductor.org/packages/MetaCyto/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.6	Source Archive