BRAIN

DOI: 10.18129/B9.bioc.BRAIN    

Baffling Recursive Algorithm for Isotope distributioN calculations

Bioconductor version: Release (3.6)

Package for calculating aggregated isotopic distribution and exact center-masses for chemical substances (in this version composed of C, H, N, O and S). This is an implementation of the BRAIN algorithm described in the paper by J. Claesen, P. Dittwald, T. Burzykowski and D. Valkenborg.

Author: Piotr Dittwald, with contributions of Dirk Valkenborg and Jurgen Claesen

Maintainer: Piotr Dittwald <piotr.dittwald at mimuw.edu.pl>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BRAIN")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BRAIN")

 

PDF	R Script	BRAIN Usage
PDF		Reference Manual

Details

biocViews	MassSpectrometry, Proteomics, Software
Version	1.24.0
In Bioconductor since	BioC 2.10 (R-2.15) (6 years)
License	GPL-2
Depends	R (>= 2.8.1), PolynomF, Biostrings, lattice
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	cleaver, RforProteomics, synapter
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BRAIN_1.24.0.tar.gz
Windows Binary	BRAIN_1.24.0.zip
Mac OS X 10.11 (El Capitan)	BRAIN_1.24.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/BRAIN
Package Short Url	http://bioconductor.org/packages/BRAIN/
Package Downloads Report	Download Stats