BEAT

DOI: 10.18129/B9.bioc.BEAT    

BEAT - BS-Seq Epimutation Analysis Toolkit

Bioconductor version: Release (3.6)

Model-based analysis of single-cell methylation data

Author: Kemal Akman <akman at mpipz.mpg.de>

Maintainer: Kemal Akman <akman at mpipz.mpg.de>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BEAT")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BEAT")

 

PDF	R Script	Analysing single-cell BS-Seq data with the "BEAT" package
PDF		Reference Manual

Details

biocViews	DNAMethylation, Epigenetics, Genetics, MethylSeq, Software
Version	1.16.0
In Bioconductor since	BioC 2.14 (R-3.1) (4 years)
License	LGPL (>= 3.0)
Depends	R (>= 2.13.0)
Imports	GenomicRanges, ShortRead, Biostrings, BSgenome
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BEAT_1.16.0.tar.gz
Windows Binary	BEAT_1.16.0.zip
Mac OS X 10.11 (El Capitan)	BEAT_1.16.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/BEAT
Package Short Url	http://bioconductor.org/packages/BEAT/
Package Downloads Report	Download Stats