plot,GatingSet,missing-method {flowWorkspace} | R Documentation |
plot a gating tree
Description
Plot a tree/graph representing the GatingHierarchy
Usage
## S4 method for signature 'GatingSet,missing'
plot(x, y, ...)
## S4 method for signature 'GatingSet,character'
plot(x, y, ...)
Arguments
x |
GatingHierarchy or GatingSet . If GatingSet , the first sample will be used to extract gating tree.
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y |
missing or character specifies.
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... |
other arguments:
boolean: TRUE|FALSE logical specifying whether to plot boolean gate nodes. Defaults to FALSE.
showHidden: TRUE|FALSE logical whether to show hidden nodes
layout:
See layoutGraph in package Rgraphviz
width:
See layoutGraph in package Rgraphviz
height:
See layoutGraph in package Rgraphviz
fontsize:
See layoutGraph in package Rgraphviz
labelfontsize:
See layoutGraph in package Rgraphviz
fixedsize:
See layoutGraph in package Rgraphviz
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Examples
## Not run:
#gs is a GatingSet
plot(gs) # the same as plot(gs[[1]])
#plot a substree rooted from 'CD4'
plot(gs, "CD4")
## End(Not run)
[Package
flowWorkspace version 3.26.9
Index]