fusionSpanningReadsCount {chimeraviz}R Documentation

Get the spanning reads count from a Fusion object

Description

This getter retrieves the spanning reads count from a Fusion object

Usage

fusionSpanningReadsCount(x)

## S4 method for signature 'Fusion'
fusionSpanningReadsCount(x)

Arguments

x

The Fusion object you wish to retrieve the spanning reads count for.

Value

The Fusion spanning reads count.

Examples

# Load data
defuseData <- system.file(
  "extdata",
  "defuse_833ke_results.filtered.tsv",
  package="chimeraviz")
fusions <- importDefuse(defuseData, "hg19", 1)
fusion <- fusions[[1]]
# Get the spanning reads count
fusionSpanningReadsCount(fusion)


[Package chimeraviz version 1.4.3 Index]