pathostat {PathoStat} | R Documentation |
Build PathoStat-class object from its phyloseq component.
pathostat(physeq1)
physeq1 |
phyloseq object |
pstat The pathostat object generated from the given phyloseq object
rich_dense_biom = system.file("extdata", "rich_dense_otu_table.biom", package="phyloseq") phyob <- phyloseq::import_biom(rich_dense_biom) pstat_biom <- pathostat(phyob)