sizeNormalize {PathoStat} | R Documentation |
Normalize the given data based on library size
sizeNormalize(zcounts)
zcounts |
Input counts data matrix |
acounts Normalized counts data matrix
example_data_dir <- system.file("example/data", package = "PathoStat") pathoreport_file_suffix <- "-sam-report.tsv" datlist <- readPathoscopeData(example_data_dir, pathoreport_file_suffix) countdat <- datlist$countdata acounts <- sizeNormalize(countdat)