lohView_qual {GenVisR} | R Documentation |
Perform a data quality check for inputs to lohView
lohView_qual(x, y, genome)
x |
object of class data frame with rows representing germline calls. The data frame must contain columns with the following names "chromosome", "position", "n_vaf", "t_vaf", "sample". |
y |
a data frame with columns "chrom", "chromStart", "chromEnd", "name", "gieStain" |
genome |
character string specifying UCSC genome to use |
a list of data frames passing quality checks