geneViz_mapCovCoordSpace {GenVisR} | R Documentation |
Reference a master genomic region file to map original positions of a coverage track to a transformed space
geneViz_mapCovCoordSpace(cov.coords, master)
cov.coords |
an object of class data frame containing columns start and end to map to transformed space, with rows demarking single nucleotide coverages |
master |
an object of class data frame containing columns start, end, width, type, trans_start, trans_end representing a master genomic region with features from isoforms merged |
an object of class data frame identical to coord but with extra columns for transformed coord