compIdent_bamRcnt_qual {GenVisR} | R Documentation |
Given the bam file path, count the number of reads at the 24 SNP locations
compIdent_bamRcnt_qual(genome, targetbed)
genome |
Object of class BSgenome corresponding to a genome of interest |
targetbed |
Object of class data frame containing target locations in .bed format |
list of data objects passing quality checks