waterfall_buildMain {GenVisR} | R Documentation |
Plot a Mutation Landscape with variables sample, gene, mutation
waterfall_buildMain(data_frame, grid = TRUE, label_x = FALSE, file_type = "MGI", drop_mutation = FALSE, plot_x_title = TRUE, plot_label = FALSE, plot_label_size = 4, plot_palette = NULL, layers = NULL, plot_label_angle = 0)
data_frame |
a data frame in MAF format |
grid |
boolean value whether to overlay a grid on the plot |
label_x |
boolean value whether to label the x axis |
file_type |
character string specifying the file type, one of 'MAF' or 'MGI' |
drop_mutation |
Boolean specifying whether to drop unused "mutation type" levels from the legend |
plot_x_title |
Boolean specifying whether to plot the x_axis title |
plot_label |
Boolean specifying whether to plot text inside each cell |
plot_label_size |
Integer specifying text size of cell labels |
plot_palette |
Character vector specifying colors to fill on mutation type |
layers |
additional ggplot2 layers to plot |
plot_label_angle |
angle at which to plot label text if plot_label is true |
a ggplot2 object