geneViz_formatUTR {GenVisR} | R Documentation |
given a Granges object specifying a region of interest, format into a form recognizable by ggplot2
geneViz_formatUTR(txdb = NULL, gr = NULL, genome = NULL, reduce = FALSE)
txdb |
A TxDb object for a genome |
gr |
A Granges object to format |
genome |
Object of class BSgenome specifying the genome for GC content calculation |
reduce |
Boolean specifying whether to collapse isoforms in the Granges object ROI |
Object of class data frame