lohSpec_qual {GenVisR} | R Documentation |
Perform data quality checks on input supplied to lohSpec
lohSpec_qual(x, y, genome)
x |
object of class data frame with columns 'chromosome', 'position', 'n_vaf', 't_vaf', 'sample' |
y |
object of class data frame with columns 'chromosome', 'start', 'end' specifying chromosomal boundaries for a genome assembly (required if genome is not specified) |
genome |
character string specifying the genome assembly from which input data is based |
list of inputs passing basic quality controls