Analysis of co-regulatory network motifs and inference of 'dual regulons'


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Documentation for package ‘RTNduals’ version 1.2.0

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RTNduals-package RTNduals: An R/Bioconductor package for analysis of co-regulatory network motifs and inference of 'dual regulons'.
MBR MBR objects
MBR-class MBR objects
mbrAssociation Motifs analysis and inference of 'dual regulons'.
mbrAssociation-method Motifs analysis and inference of 'dual regulons'.
mbrBootstrap Inference of consensus transcriptional networks.
mbrBootstrap-method Inference of consensus transcriptional networks.
mbrDpiFilter A filter based on the Data Processing Inequality (DPI) algorithm.
mbrDpiFilter-method A filter based on the Data Processing Inequality (DPI) algorithm.
mbrDuals A summary for results from the MBR methods.
mbrDuals-method A summary for results from the MBR methods.
mbrGet Get information from individual slots in MBR object.
mbrGet-method Get information from individual slots in MBR object.
mbrPermutation Inference of transcriptional networks.
mbrPermutation-method Inference of transcriptional networks.
mbrPlotDuals Plot shared target clouds between dual regulons.
mbrPreprocess A preprocessing function for objects of class MBR.
mbrPreprocess-method A preprocessing function for objects of class MBR.
RTNduals RTNduals: An R/Bioconductor package for analysis of co-regulatory network motifs and inference of 'dual regulons'.
tni2mbrPreprocess A preprocessing function for objects of class MBR.
tni2mbrPreprocess-method A preprocessing function for objects of class MBR.