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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GenRank")
In most cases, you don't need to download the package archive at all.
GenRank
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Candidate gene prioritization based on convergent evidence
Bioconductor version: Release (3.5)
Methods for ranking genes based on convergent evidence obtained from multiple independent evidence layers. This package adapts three methods that are popular for meta-analysis.
Author: Chakravarthi Kanduri
Maintainer: Chakravarthi Kanduri <chakra.kanduri at gmail.com>
Citation (from within R,
enter citation("GenRank")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GenRank")
Documentation
| HTML | R Script | Introduction to GenRank Package |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | CopyNumberVariation, GeneExpression, Genetics, Microarray, SNP, Sequencing, Software |
| Version | 1.4.0 |
| In Bioconductor since | BioC 3.3 (R-3.3) (1.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.2.3) |
| Imports | matrixStats, reshape2, survcomp |
| LinkingTo | |
| Suggests | knitr, rmarkdown, testthat |
| SystemRequirements | |
| Enhances | |
| URL | https://github.com/chakri9/GenRank |
| BugReports | https://github.com/chakri9/GenRank/issues |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | GenRank_1.4.0.tar.gz |
| Windows Binary | GenRank_1.4.0.zip |
| Mac OS X 10.11 (El Capitan) | GenRank_1.4.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/GenRank |
| Package Short Url | http://bioconductor.org/packages/GenRank/ |
| Package Downloads Report | Download Stats |
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