To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BRAIN")

In most cases, you don't need to download the package archive at all.

BRAIN

DOI: 10.18129/B9.bioc.BRAIN    

Baffling Recursive Algorithm for Isotope distributioN calculations

Bioconductor version: Release (3.5)

Package for calculating aggregated isotopic distribution and exact center-masses for chemical substances (in this version composed of C, H, N, O and S). This is an implementation of the BRAIN algorithm described in the paper by J. Claesen, P. Dittwald, T. Burzykowski and D. Valkenborg.

Author: Piotr Dittwald, with contributions of Dirk Valkenborg and Jurgen Claesen

Maintainer: Piotr Dittwald <piotr.dittwald at mimuw.edu.pl>

Citation (from within R, enter citation("BRAIN")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BRAIN")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BRAIN")

 

PDF R Script BRAIN Usage
PDF   Reference Manual

Details

biocViews MassSpectrometry, Proteomics, Software
Version 1.22.0
In Bioconductor since BioC 2.10 (R-2.15) (5.5 years)
License GPL-2
Depends R (>= 2.8.1), PolynomF, Biostrings, lattice
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me cleaver, RforProteomics, synapter
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BRAIN_1.22.0.tar.gz
Windows Binary BRAIN_1.22.0.zip
Mac OS X 10.11 (El Capitan) BRAIN_1.22.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/BRAIN
Package Short Url http://bioconductor.org/packages/BRAIN/
Package Downloads Report Download Stats

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