- Home
- Bioconductor 3.5
- Software Packages
- AnnotationFilter
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("AnnotationFilter")
In most cases, you don't need to download the package archive at all.
AnnotationFilter
|
|
|
|
|
Facilities for Filtering Bioconductor Annotation Resources
Bioconductor version: Release (3.5)
This package provides class and other infrastructure to implement filters for manipulating Bioconductor annotation resources. The filters will be used by ensembldb, Organism.dplyr, and other packages.
Author: Martin Morgan [aut], Johannes Rainer [aut], Bioconductor Maintainer [cre]
Maintainer: Bioconductor Maintainer <maintainer at bioconductor.org>
Citation (from within R,
enter citation("AnnotationFilter")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("AnnotationFilter")
Documentation
| HTML | R Script | Facilities for Filtering Bioconductor Annotation resources |
| Reference Manual | ||
| Text | README | |
| Text | NEWS |
Details
| biocViews | Annotation, Infrastructure, Software |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.5 (R-3.4) (0.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.4.0) |
| Imports | utils, methods, GenomicRanges, lazyeval |
| LinkingTo | |
| Suggests | BiocStyle, knitr, testthat, RSQLite, org.Hs.eg.db |
| SystemRequirements | |
| Enhances | |
| URL | https://github.com/Bioconductor/AnnotationFilter |
| BugReports | https://github.com/Bioconductor/AnnotationFilter/issues |
| Depends On Me | chimeraviz, ensembldb |
| Imports Me | biovizBase, ggbio, Pbase, TVTB |
| Suggests Me | wiggleplotr |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | AnnotationFilter_1.0.0.tar.gz |
| Windows Binary | AnnotationFilter_1.0.0.zip |
| Mac OS X 10.11 (El Capitan) | AnnotationFilter_1.0.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/AnnotationFilter |
| Package Short Url | http://bioconductor.org/packages/AnnotationFilter/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
