Piecewise Linear Regression Splines (PLRS) for the association between DNA copy number and gene expression


[Up] [Top]

Documentation for package ‘plrs’ version 1.16.0

Help Pages

plrs-package Piecewise Linear Regression Splines (PLRS) for the association between DNA copy number and mRNA expression
coef-method Class 'plrs'
criteria Compute AIC, AICC, BIC and OSAIC for a given 'plrs' model.
criteria-method Compute AIC, AICC, BIC and OSAIC for a given 'plrs' model.
effects-method Class 'plrs'
fitted-method Class 'plrs'
knots-method Class 'plrs'
model.matrix-method Class 'plrs'
modify.conf Modify the configuration (of calls) of the plrs model
neveCN17 Copy number for chromosome 17.
neveGE17 mRNA expression for chromosome 17.
plot,ANY Plot functions in package 'plrs'
plot-method Plot functions in package 'plrs'
plot-methods Plot functions in package 'plrs'
plot.plrs Plot functions in package 'plrs'
plrs Fit a (constrained) piecewise linear regression spline
plrs,ANY Fit a (constrained) piecewise linear regression spline
plrs-class Class 'plrs'
plrs.cb Uniform confidence bands (CB) for plrs models
plrs.select Model selection
plrs.select,ANY Model selection
plrs.select-class Class 'plrs.select'
plrs.series Fit plrs models for a series of arrays.
plrs.series-class Class 'plrs.series'
plrs.sim Simulation of a plrs model
plrs.test Likelihood ratio test for a 'plrs' model
predict-method Class 'plrs'
predict.plrs Predict method for 'plrs' models
print-method Class 'plrs'
print-method Class 'plrs.select'
print-method Class 'plrs.series'
residuals-method Class 'plrs'
show-method Class 'plrs'
show-method Class 'plrs.select'
show-method Class 'plrs.series'
summary-method Class 'plrs'
summary-method Class 'plrs.select'
summary-method Class 'plrs.series'