chipframe | Probe to Entrez Gene ID mappings |
consensusDistance | Calculate a distribution of distances from a consensus fingerprint |
consensusFingerprint | Construct a consensus fingerprint |
customCDFAnn | Map probes to Entrez Gene IDs |
diffPathways | Detect differentially activated pathways between fingerprints |
exprs2fingerprint | Create a pathway fingerprint from a gene expression table. |
genesets | Names of genesets used in pathprint |
GEO.fingerprint.matrix | Create a pathway fingerprint from a gene expression table. |
GEO.metadata.matrix | Create a pathway fingerprint from a gene expression table. |
Introduction to pathprint | Pathway fingerprinting for analysis of gene expression arrays |
pathprint | Pathway fingerprinting for analysis of gene expression arrays |
pathprint.Ce.gs | Pathprint genesets - C. elegans |
pathprint.Dm.gs | Pathprint genesets - D. melanogaster |
pathprint.Dr.gs | Pathprint genesets - D. rerio |
pathprint.Hs.gs | Pathprint genesets - H. sapiens |
pathprint.Mm.gs | Pathprint genesets - M. musculus |
pathprint.Rn.gs | Pathprint genesets - R. norvegicus |
platform.thresholds | Pathway fingerprint threshold values |
pluripotents.frame | Manually curated list of pluripotent arrays |
single.chip.enrichment | Calculate enrichment of a list of genesets in an array |
thresholdFingerprint | Apply threshold values to produce a Pathway Fingerprint |