Optimal Gene Extensions From Histone Modification ChIP-seq Data


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Documentation for package ‘geneXtendeR’ version 1.2.0

Help Pages

annotate Annotate peaks file.
barChart Produces bar charts.
distinct Finds unique genes under peaks.
linePlot Produces line plots.
peaksInput Preprocesses a peaks input file.
rat Gene transfer format (GTF) file for rat (Rattus_norvegicus.Rnor_6.0.84)
samplepeaksinput Sample peaks list to be used as input to geneXtendeR