Outlier Gene Set Analysis


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Documentation for package ‘OGSA’ version 1.6.0

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OGSA-package This package uses outlier statistics and gene set analysis to identify deregulated pathways.
cnv Copy number variation data
copaInt copaInt
copaIntE copaIntE
copaStat copaStat
expr expr
meth meth
OGSA This package uses outlier statistics and gene set analysis to identify deregulated pathways.
outCallRank outCallRank
outCallRankE outCallRankE
outCallTib outCallTib
outCallTibE outCallTibE
outCount outCount
outMap outMap
outRank outRank
pathGS Gene set defined by BioCarta pathway
pheno pheno
testGScogps testGScogps