Making Enriched Heatmaps


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Documentation for package ‘EnrichedHeatmap’ version 1.6.0

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+.AdditiveUnit Add heatmaps or row annotations to a heatmap list
anno_enriched Annotation function to show the enrichment
copyAttr Copy attributes to another object
default_smooth_fun Default smooth function
draw Method dispatch page for draw
draw-method Draw a single heatmap
draw-method Draw a list of heatmaps
EnrichedHeatmap Constructor method for EnrichedHeatmap class
EnrichedHeatmap-class Class for a single heatmap
EnrichedHeatmapList Constructor method for EnrichedHeatmapList class
EnrichedHeatmapList-class Class for a list of heatmaps
enriched_score Enriched scores
getSignalsFromList Get signals from a list
makeWindows Split regions into windows
normalizeToMatrix Normalize associations between genomic signals and target regions into a matrix
print.normalizedMatrix Print normalized matrix
show Method dispatch page for show
show-method Draw the single heatmap with default parameters
show-method Draw a list of heatmaps with default parameters
[.normalizedMatrix Subset normalized matrix by rows