BioCor-package |
BioCor: A package to calculate functional similarities |
addSimilarities |
Additive integration of similarities |
AintoB |
Insert a matrix into another |
BioCor |
BioCor: A package to calculate functional similarities |
clusterGeneSim |
Similarity score between clusters of genes based on genes similarity |
clusterSim |
Similarity score between clusters of genes based on pathways similarity |
combinadic |
i-th combination of n elements taken from r |
combineScores |
Combining values |
conversions |
Convert the similarities formats |
D2J |
Convert the similarities formats |
diceSim |
Compare pathways |
duplicateIndices |
Finds the indices of the duplicated events of a vector |
geneSim |
Similarity score genes based on pathways similarity |
J2D |
Convert the similarities formats |
mclusterGeneSim |
Similarity score between clusters of genes based on genes similarity |
mclusterSim |
Similarity score between clusters of genes based on pathways similarity |
mgeneSim |
Similarity score genes based on pathways similarity |
mpathSim |
Calculates the Dice similarity between pathways |
pathSim |
Calculates the Dice similarity between pathways |
removeDup |
Remove duplicated rows and columns |
seq2mat |
Transforms a vector to a symmetric matrix |
similarities |
Apply a function to a list of similarities |
weighted |
Weighted operations |
weighted.prod |
Weighted operations |
weighted.sum |
Weighted operations |