addCLT |
The additive method for meta-analysis |
bilevelAnalysisClassic |
Bi-level meta-analysis in conjunction with a classical hypothesis testing method |
bilevelAnalysisGene |
Bi-level meta-analysis of multiple expression datasets at the gene-level |
bilevelAnalysisGeneset |
Bi-level meta-analysis - applied to geneset enrichment analysis |
bilevelAnalysisPathway |
Bi-level meta-analysis - applied to pathway analysis |
data_GSE17054 |
Gene expression dataset GSE17054 from Majeti et al. |
data_GSE33223 |
Gene expression dataset GSE33223 from Bacher et al. |
data_GSE42140 |
The gene expression dataset GSE42140 obtained from Gene Expression Omnibus |
data_GSE57194 |
Gene expression dataset GSE57194 from Abdul-Nabi et al. |
fisherMethod |
Fisher's method for meta-analysis |
group_GSE17054 |
Gene expression dataset GSE17054 from Majeti et al. |
group_GSE33223 |
Gene expression dataset GSE33223 from Bacher et al. |
group_GSE42140 |
The gene expression dataset GSE42140 obtained from Gene Expression Omnibus |
group_GSE57194 |
Gene expression dataset GSE57194 from Abdul-Nabi et al. |
GSE17054 |
Gene expression dataset GSE17054 from Majeti et al. |
GSE33223 |
Gene expression dataset GSE33223 from Bacher et al. |
GSE42140 |
The gene expression dataset GSE42140 obtained from Gene Expression Omnibus |
GSE57194 |
Gene expression dataset GSE57194 from Abdul-Nabi et al. |
intraAnalysisClassic |
Intra-experiment analysis in conjunction with classical hypothesis tests |
intraAnalysisGene |
Intra-experiment analysis of an expression dataset at the gene-level |
loadKEGGPathways |
Load KEGG pathways and names |
stoufferMethod |
Stouffer's method for meta-analysis |