To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("spkTools")

In most cases, you don't need to download the package archive at all.

spkTools

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see spkTools.

Methods for Spike-in Arrays

Bioconductor version: 3.4

The package contains functions that can be used to compare expression measures on different array platforms.

Author: Matthew N McCall <mccallm at gmail.com>, Rafael A Irizarry <rafa at jhu.edu>

Maintainer: Matthew N McCall <mccallm at gmail.com>

Citation (from within R, enter citation("spkTools")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("spkTools")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("spkTools")

PDF	R Script	spkTools: Spike-in Data Analysis and Visualization
PDF		Reference Manual

biocViews	Microarray, Software, Technology
Version	1.30.0
In Bioconductor since	BioC 2.4 (R-2.9) (8 years)
License	GPL (>= 2)
Depends	R (>= 2.7.0), Biobase(>= 2.5.5)
Imports	Biobase(>= 2.5.5), graphics, grDevices, gtools, methods, RColorBrewer, stats, utils
LinkingTo
Suggests	xtable
SystemRequirements
Enhances
URL	http://bioconductor.org
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	spkTools_1.30.0.tar.gz
Windows Binary	spkTools_1.30.0.zip
Mac OS X 10.9 (Mavericks)	spkTools_1.30.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/spkTools/tree/release-3.4
Package Short Url	http://bioconductor.org/packages/spkTools/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: