To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("sights")
In most cases, you don't need to download the package archive at all.
sights
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see sights.
Statistics and dIagnostic Graphs for HTS
Bioconductor version: 3.4
SIGHTS is a suite of normalization methods, statistical tests, and diagnostic graphical tools for high throughput screening (HTS) assays. HTS assays use microtitre plates to screen large libraries of compounds for their biological, chemical, or biochemical activity.
Author: Elika Garg [aut, cre], Carl Murie [aut], Heydar Ensha [ctb], Robert Nadon [aut]
Maintainer: Elika Garg <elika.garg at mail.mcgill.ca>
Citation (from within R,
enter citation("sights")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("sights")
Documentation
| HTML | R Script | Using **SIGHTS** R-package |
| Reference Manual | ||
| Text | NEWS | |
| Text | LICENSE |
Details
| biocViews | BatchEffect, CellBasedAssays, MicrotitrePlateAssay, MultipleComparison, Normalization, Preprocessing, QualityControl, Software, Visualization |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (0.5 years) |
| License | GPL-3 | file LICENSE |
| Depends | R (>= 3.3) |
| Imports | MASS (>= 7.3), qvalue(>= 2.2), ggplot2 (>= 2.0), reshape2 (>= 1.4), lattice (>= 0.2), stats (>= 3.3) |
| LinkingTo | |
| Suggests | testthat, knitr, rmarkdown, ggthemes, gridExtra, xlsx |
| SystemRequirements | |
| Enhances | |
| URL | https://eg-r.github.io/sights/ |
| BugReports | https://github.com/eg-r/sights/issues |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | sights_1.0.0.tar.gz |
| Windows Binary | sights_1.0.0.zip |
| Mac OS X 10.9 (Mavericks) | sights_1.0.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/sights/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/sights/ |
| Package Downloads Report | Download Stats |
Documentation »
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