To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pmm")
In most cases, you don't need to download the package archive at all.
pmm
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see pmm.
Parallel Mixed Model
Bioconductor version: 3.4
The Parallel Mixed Model (PMM) approach is suitable for hit selection and cross-comparison of RNAi screens generated in experiments that are performed in parallel under several conditions. For example, we could think of the measurements or readouts from cells under RNAi knock-down, which are infected with several pathogens or which are grown from different cell lines.
Author: Anna Drewek
Maintainer: Anna Drewek <adrewek at stat.math.ethz.ch>
Citation (from within R,
enter citation("pmm")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pmm")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("pmm")
| R Script | User manual for R-Package PMM | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Regression, Software, SystemsBiology |
| Version | 1.6.0 |
| In Bioconductor since | BioC 3.1 (R-3.2) (2 years) |
| License | GPL-3 |
| Depends | R (>= 2.10) |
| Imports | lme4, splines |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | pmm_1.6.0.tar.gz |
| Windows Binary | pmm_1.6.0.zip |
| Mac OS X 10.9 (Mavericks) | pmm_1.6.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/pmm/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/pmm/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
