- Home
- Bioconductor 3.4
- Software Packages
- globalSeq
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("globalSeq")
In most cases, you don't need to download the package archive at all.
globalSeq
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see globalSeq.
Testing for association between RNA-Seq and high-dimensional data
Bioconductor version: 3.4
The method may be conceptualised as a test of overall significance in regression analysis, where the response variable is overdispersed and the number of explanatory variables exceeds the sample size.
Author: Armin Rauschenberger
Maintainer: Armin Rauschenberger <a.rauschenberger at vumc.nl>
Citation (from within R,
enter citation("globalSeq")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("globalSeq")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("globalSeq")
| R Script | globalSeq | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | DifferentialExpression, DimensionReduction, ExomeSeq, ExonArray, GeneExpression, GenomeWideAssociation, MultipleComparison, RNASeq, Regression, Sequencing, Software, Transcriptomics, WholeGenome, miRNA |
| Version | 1.2.0 |
| In Bioconductor since | BioC 3.3 (R-3.3) (1 year) |
| License | GPL-3 |
| Depends | R (>= 3.3.0) |
| Imports | |
| LinkingTo | |
| Suggests | knitr, testthat, SummarizedExperiment |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | globalSeq_1.2.0.tar.gz |
| Windows Binary | globalSeq_1.2.0.zip |
| Mac OS X 10.9 (Mavericks) | globalSeq_1.2.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/globalSeq/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/globalSeq/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
