To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("fdrame")
In most cases, you don't need to download the package archive at all.
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see fdrame.
Bioconductor version: 3.4
This package contains two main functions. The first is fdr.ma which takes normalized expression data array, experimental design and computes adjusted p-values It returns the fdr adjusted p-values and plots, according to the methods described in (Reiner, Yekutieli and Benjamini 2002). The second, is fdr.gui() which creates a simple graphic user interface to access fdr.ma
Author: Yoav Benjamini, Effi Kenigsberg, Anat Reiner, Daniel Yekutieli
Maintainer: Effi Kenigsberg <effiken.fdrame at gmail.com>
Citation (from within R,
enter citation("fdrame")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("fdrame")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("fdrame")
Annotation Overview | ||
Reference Manual |
biocViews | DifferentialExpression, Microarray, MultipleComparison, Software |
Version | 1.46.0 |
In Bioconductor since | BioC 1.7 (R-2.2) (11.5 years) |
License | GPL (>= 2) |
Depends | |
Imports | tcltk, graphics, grDevices, stats, utils |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | fdrame_1.46.0.tar.gz |
Windows Binary | fdrame_1.46.0.zip (32- & 64-bit) |
Mac OS X 10.9 (Mavericks) | fdrame_1.46.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/fdrame/tree/release-3.4 |
Package Short Url | http://bioconductor.org/packages/fdrame/ |
Package Downloads Report | Download Stats |
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