SVAPLSseq-package |
SVAPLSseq: An R package to adjust for the hidden factors of variability in differential gene expression studies based on RNAseq data. |
prop.vars |
Accessor for the 'prop.vars' slot of a 'svplsSurr' object |
prop.vars-method |
Accessor for the 'prop.vars' slot of a 'svplsSurr' object |
pvars.svplsSurr |
Accessor for the 'prop.vars' slot of a 'svplsSurr' object |
pvs.adj |
Accessor for the 'pvs.adj' slot of a 'svplsTest' object |
pvs.adj-method |
Accessor for the 'pvs.adj' slot of a 'svplsTest' object |
pvs.adj.svplsTest |
Accessor for the 'pvs.adj' slot of a 'svplsTest' object |
pvs.unadj |
Accessor for the 'pvs.unadj' slot of a 'svplsTest' object |
pvs.unadj-method |
Accessor for the 'pvs.unadj' slot of a 'svplsTest' object |
pvs.unadj.svplsTest |
Accessor for the 'pvs.unadj' slot of a 'svplsTest' object |
sig.genes |
Accessor for the 'sig.genes' slot of a 'svplsTest' object |
sig.genes-method |
Accessor for the 'sig.genes' slot of a 'svplsTest' object |
sig.genes.svplsTest |
Accessor for the 'sig.genes' slot of a 'svplsTest' object |
sim.dat |
A simulated RNAseq gene expression count data affected by multiple hidden variables. |
surr |
Accessor for the 'surr' slot of a 'svplsSurr' object |
surr-method |
Accessor for the 'surr' slot of a 'svplsSurr' object |
surr.svplsSurr |
Accessor for the 'surr' slot of a 'svplsSurr' object |
SVAPLSseq |
SVAPLSseq: An R package to adjust for the hidden factors of variability in differential gene expression studies based on RNAseq data. |
svplsSurr |
svplsSurr |
svplsSurr-class |
svplsSurr |
svplsTest |
svplsTest |
svplsTest-class |
svplsTest |