Linear model and normality based transformation method (Linnorm)


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Documentation for package ‘Linnorm’ version 1.2.11

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Islam2011 scRNA-seq data from Islam et al. 2011
LIHC Partial RNA-seq data from TCGA LIHC (Liver Hepatocellular Carcinoma)
Linnorm Linnorm Transformation Function
Linnorm.Cor Linnorm-gene correlation network analysis.
Linnorm.HClust Linnorm-hierarchical clustering analysis.
Linnorm.HVar Linnorm-Hvar pipeline for highly variable gene discovery.
Linnorm.limma Linnorm-limma pipeline for Differentially Expression Analysis
Linnorm.PCA Linnorm-PCA Clustering pipeline for subpopulation Analysis
RnaXSim This function simulates a RNA-seq dataset based on a given distribution.
SEQC Partial RNA-seq data from SEQC/MAQC-III Sample A