GUIDEseq-package | Analysis of GUIDE-seq |
annotateOffTargets | Annotate offtargets with gene name |
combineOfftargets | Combine Offtargets |
getPeaks | Obtain peaks from GUIDE-seq |
getUniqueCleavageEvents | Using UMI sequence to obtain the starting sequence library |
GUIDEseq | Analysis of GUIDE-seq |
GUIDEseqAnalysis | Analysis pipeline for GUIDE-seq dataset |
mergePlusMinusPeaks | Merge peaks from plus strand and minus strand |
offTargetAnalysisOfPeakRegions | Offtarget Analysis of GUIDE-seq peaks |
peaks.gr | example cleavage sites |
uniqueCleavageEvents | example unique cleavage sites |