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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("greengenes13.5MgDb")
In most cases, you don't need to download the package archive at all.
greengenes13.5MgDb
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This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see greengenes13.5MgDb.
Greengenes 13.5 16S rRNA Database Annotation Data
Bioconductor version: 3.3
Metagenome annotation package with for the Greengenes 16S rRNA Database version 13.5. Contains a MgDb-class object, defined in the metagenomeFeatures package.
Author: Nathan D. Olson <nolson at umias.umd.edu>, Joseph Nathaniel Paulson, Hector Corrada-Bravo
Maintainer: Nathan D. Olson <nolson at umiacs.umd.edu>
Citation (from within R,
enter citation("greengenes13.5MgDb")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("greengenes13.5MgDb")
Documentation
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | AnnotationData, Metagenomics, Microbiome, Sequencing |
| Version | 0.99.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.2.0) |
| Imports | metagenomeFeatures |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | https://github.com/HCBravoLab/greengenes13.5MgDb |
| BugReports | https://github.com/HCBravoLab/greengenes13.5MgDb/issues |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | greengenes13.5MgDb_0.99.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.9 (Mavericks) | |
| Package Short Url | http://bioconductor.org/packages/greengenes13.5MgDb/ |
| Package Downloads Report | Download Stats |
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