To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("OCplus")

In most cases, you don't need to download the package archive at all.

OCplus

   

This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see OCplus.

Operating characteristics plus sample size and local fdr for microarray experiments

Bioconductor version: 3.3

This package allows to characterize the operating characteristics of a microarray experiment, i.e. the trade-off between false discovery rate and the power to detect truly regulated genes. The package includes tools both for planned experiments (for sample size assessment) and for already collected data (identification of differentially expressed genes).

Author: Yudi Pawitan <Yudi.Pawitan at ki.se> and Alexander Ploner <Alexander.Ploner at ki.se>

Maintainer: Alexander Ploner <Alexander.Ploner at ki.se>

Citation (from within R, enter citation("OCplus")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("OCplus")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("OCplus")

 

PDF R Script OCplus Introduction
PDF   Reference Manual

Details

biocViews DifferentialExpression, Microarray, MultipleComparison, Software
Version 1.46.0
In Bioconductor since BioC 1.8 (R-2.3) (10.5 years)
License LGPL
Depends R (>= 2.1.0), akima
Imports multtest(>= 1.7.3), graphics, grDevices, stats
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source OCplus_1.46.0.tar.gz
Windows Binary OCplus_1.46.0.zip
Mac OS X 10.9 (Mavericks) OCplus_1.46.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/OCplus/tree/release-3.3
Package Short Url http://bioconductor.org/packages/OCplus/
Package Downloads Report Download Stats

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