genotype.saap | SAAP genotype dataset |
genotype.saap.msa | SAAP genotype dataset (msa) |
genotype.snp | SNP genotype dataset |
genotype.snp.msa | SNP genotype dataset (msa) |
phenotype.saap | Phenotype dataset |
phenotype.snp | Phenotype dataset |
plotGenphenResults | Visualizing GWAS results |
plotManhattan | Visualizing genphen results with Manhattan plots |
plotSpecificGenotype | Visualizing specific genotypes |
runGenphenSaap | Performing genetic association analysis between SAAPs and phenotypes |
runGenphenSnp | Performing genetic association analysis between SNPs and phenotypes |