eudysbiome-package |
eudysbiome. |
assignTax |
Taxonomic Classification |
contingencyCount |
Contingency Table Construction |
contingencyTest |
Contingency test for count data |
diffGenera |
Differential microbes in Genus-Species table A data frame containing 10 differential genera and the species included, which was to be annotated as '"harmful"' or '"harmless"'. |
eudysbiome |
eudysbiome. |
harmGenera |
Manually curated genera annotation table A data frame containing 235 genera annotated as "harmful" and the harmful species included in these genera. |
microAnnotate |
Genus Annotation |
microCount |
Microbial count contingency table |
microDiff |
Differential annotated genera with abundance variations among pair-wise condition comparisons |
tableSpecies |
Construct a Genus-Species Data Frame |