BasicFilter-class	GeneidFilter-class
buildQuery	EnsDb-class
buildQuery,EnsDb-method	EnsDb-class
cdsBy	EnsDb-exonsBy
cdsBy,EnsDb-method	EnsDb-exonsBy
column	GeneidFilter-class
column,EntrezidFilter,EnsDb,character-method	GeneidFilter-class
column,EntrezidFilter,EnsDb,missing-method	GeneidFilter-class
column,EntrezidFilter,missing,missing-method	GeneidFilter-class
column,ExonidFilter,EnsDb,character-method	GeneidFilter-class
column,ExonidFilter,EnsDb,missing-method	GeneidFilter-class
column,ExonidFilter,missing,missing-method	GeneidFilter-class
column,ExonrankFilter,EnsDb,character-method	GeneidFilter-class
column,ExonrankFilter,EnsDb,missing-method	GeneidFilter-class
column,ExonrankFilter,missing,missing-method	GeneidFilter-class
column,GenebiotypeFilter,EnsDb,character-method	GeneidFilter-class
column,GenebiotypeFilter,EnsDb,missing-method	GeneidFilter-class
column,GenebiotypeFilter,missing,missing-method	GeneidFilter-class
column,GeneidFilter,EnsDb,character-method	GeneidFilter-class
column,GeneidFilter,EnsDb,missing-method	GeneidFilter-class
column,GeneidFilter,missing,missing-method	GeneidFilter-class
column,GenenameFilter,EnsDb,character-method	GeneidFilter-class
column,GenenameFilter,EnsDb,missing-method	GeneidFilter-class
column,GenenameFilter,missing,missing-method	GeneidFilter-class
column,GRangesFilter,EnsDb,character-method	GeneidFilter-class
column,GRangesFilter,EnsDb,missing-method	GeneidFilter-class
column,GRangesFilter,missing,missing-method	GeneidFilter-class
column,SeqendFilter,EnsDb,character-method	GeneidFilter-class
column,SeqendFilter,EnsDb,missing-method	GeneidFilter-class
column,SeqendFilter,missing,missing-method	GeneidFilter-class
column,SeqnameFilter,EnsDb,character-method	GeneidFilter-class
column,SeqnameFilter,EnsDb,missing-method	GeneidFilter-class
column,SeqnameFilter,missing,missing-method	GeneidFilter-class
column,SeqstartFilter,EnsDb,character-method	GeneidFilter-class
column,SeqstartFilter,EnsDb,missing-method	GeneidFilter-class
column,SeqstartFilter,missing,missing-method	GeneidFilter-class
column,SeqstrandFilter,EnsDb,character-method	GeneidFilter-class
column,SeqstrandFilter,EnsDb,missing-method	GeneidFilter-class
column,SeqstrandFilter,missing,missing-method	GeneidFilter-class
column,TxbiotypeFilter,EnsDb,character-method	GeneidFilter-class
column,TxbiotypeFilter,EnsDb,missing-method	GeneidFilter-class
column,TxbiotypeFilter,missing,missing-method	GeneidFilter-class
column,TxidFilter,EnsDb,character-method	GeneidFilter-class
column,TxidFilter,EnsDb,missing-method	GeneidFilter-class
column,TxidFilter,missing,missing-method	GeneidFilter-class
columns,EnsDb-method	EnsDb-AnnotationDbi
condition	GeneidFilter-class
condition,BasicFilter-method	GeneidFilter-class
condition,GRangesFilter-method	GeneidFilter-class
condition<-	GeneidFilter-class
condition<-,BasicFilter-method	GeneidFilter-class
condition<-,GRangesFilter-method	GeneidFilter-class
dbconn	EnsDb-class
dbconn,EnsDb-method	EnsDb-class
disjointExons,EnsDb-method	EnsDb-exonsBy
end,GRangesFilter-method	GeneidFilter-class
EnsDb	EnsDb-class
EnsDb-class	EnsDb-class
ensDbFromAH	makeEnsemblDbPackage
ensDbFromGff	makeEnsemblDbPackage
ensDbFromGRanges	makeEnsemblDbPackage
ensDbFromGtf	makeEnsemblDbPackage
ensemblVersion	EnsDb-class
ensemblVersion,EnsDb-method	EnsDb-class
EntrezidFilter	SeqendFilter
EntrezidFilter-class	GeneidFilter-class
ExonidFilter	SeqendFilter
ExonidFilter-class	GeneidFilter-class
ExonrankFilter	SeqendFilter
ExonrankFilter-class	GeneidFilter-class
exons	EnsDb-exonsBy
exons,EnsDb-method	EnsDb-exonsBy
exonsBy	EnsDb-exonsBy
exonsBy,EnsDb-method	EnsDb-exonsBy
exonsByOverlaps,EnsDb-method	EnsDb-exonsBy
fetchTablesFromEnsembl	makeEnsemblDbPackage
fiveUTRsByTranscript,EnsDb-method	EnsDb-exonsBy
GenebiotypeFilter	SeqendFilter
GenebiotypeFilter-class	GeneidFilter-class
GeneidFilter	SeqendFilter
GeneidFilter-class	GeneidFilter-class
GenenameFilter	SeqendFilter
GenenameFilter-class	GeneidFilter-class
genes	EnsDb-exonsBy
genes,EnsDb-method	EnsDb-exonsBy
getGeneRegionTrackForGviz	EnsDb-utils
getGeneRegionTrackForGviz,EnsDb-method	EnsDb-utils
getGenomeFaFile	EnsDb-sequences
getGenomeFaFile,EnsDb-method	EnsDb-sequences
GRangesFilter	SeqendFilter
GRangesFilter-class	GeneidFilter-class
keys,EnsDb-method	EnsDb-AnnotationDbi
keytypes,EnsDb-method	EnsDb-AnnotationDbi
lengthOf	EnsDb-lengths
lengthOf,EnsDb-method	EnsDb-lengths
lengthOf,GRangesList-method	EnsDb-lengths
listColumns	EnsDb-class
listColumns,EnsDb-method	EnsDb-class
listGenebiotypes	EnsDb-class
listGenebiotypes,EnsDb-method	EnsDb-class
listTables	EnsDb-class
listTables,EnsDb-method	EnsDb-class
listTxbiotypes	EnsDb-class
listTxbiotypes,EnsDb-method	EnsDb-class
makeEnsembldbPackage	makeEnsemblDbPackage
makeEnsemblSQLiteFromTables	makeEnsemblDbPackage
mapIds,EnsDb-method	EnsDb-AnnotationDbi
metadata	EnsDb-class
metadata,EnsDb-method	EnsDb-class
organism	EnsDb-class
organism,EnsDb-method	EnsDb-class
print,BasicFilter-method	GeneidFilter-class
promoters	EnsDb-exonsBy
promoters,EnsDb-method	EnsDb-exonsBy
runEnsDbApp	runEnsDbApp
select	EnsDb-AnnotationDbi
select,EnsDb-method	EnsDb-AnnotationDbi
SeqendFilter	SeqendFilter
SeqendFilter-class	GeneidFilter-class
seqinfo	EnsDb-class
seqinfo,EnsDb-method	EnsDb-class
seqlevels	EnsDb-class
seqlevels,EnsDb-method	EnsDb-class
seqlevels,GRangesFilter-method	GeneidFilter-class
seqlevelsStyle	EnsDb-seqlevels
seqlevelsStyle,EnsDb-method	EnsDb-seqlevels
seqlevelsStyle<-	EnsDb-seqlevels
seqlevelsStyle<-,EnsDb-method	EnsDb-seqlevels
SeqnameFilter	SeqendFilter
SeqnameFilter-class	GeneidFilter-class
seqnames,GRangesFilter-method	GeneidFilter-class
SeqstartFilter	SeqendFilter
SeqstartFilter-class	GeneidFilter-class
SeqstrandFilter	SeqendFilter
SeqstrandFilter-class	GeneidFilter-class
show	EnsDb-class
show,BasicFilter-method	GeneidFilter-class
show,EnsDb-method	EnsDb-class
show,GRangesFilter-method	GeneidFilter-class
start,GRangesFilter-method	GeneidFilter-class
strand,GRangesFilter-method	GeneidFilter-class
supportedSeqlevelsStyles	EnsDb-seqlevels
supportedSeqlevelsStyles,EnsDb-method	EnsDb-seqlevels
threeUTRsByTranscript,EnsDb-method	EnsDb-exonsBy
toSAF	EnsDb-exonsBy
toSAF,GRangesList-method	EnsDb-exonsBy
transcripts	EnsDb-exonsBy
transcripts,EnsDb-method	EnsDb-exonsBy
transcriptsBy	EnsDb-exonsBy
transcriptsBy,EnsDb-method	EnsDb-exonsBy
transcriptsByOverlaps,EnsDb-method	EnsDb-exonsBy
TxbiotypeFilter	SeqendFilter
TxbiotypeFilter-class	GeneidFilter-class
TxidFilter	SeqendFilter
TxidFilter-class	GeneidFilter-class
updateEnsDb	EnsDb-class
updateEnsDb,EnsDb-method	EnsDb-class
value	GeneidFilter-class
value,BasicFilter,EnsDb-method	GeneidFilter-class
value,BasicFilter,missing-method	GeneidFilter-class
value,GRangesFilter,EnsDb-method	GeneidFilter-class
value,GRangesFilter,missing-method	GeneidFilter-class
value,SeqnameFilter,EnsDb-method	GeneidFilter-class
value<-	GeneidFilter-class
value<-,BasicFilter-method	GeneidFilter-class
value<-,ExonrankFilter-method	GeneidFilter-class
where	GeneidFilter-class
where,BasicFilter,EnsDb,character-method	GeneidFilter-class
where,BasicFilter,EnsDb,missing-method	GeneidFilter-class
where,BasicFilter,missing,missing-method	GeneidFilter-class
where,EntrezidFilter,EnsDb,character-method	GeneidFilter-class
where,EntrezidFilter,EnsDb,missing-method	GeneidFilter-class
where,EntrezidFilter,missing,missing-method	GeneidFilter-class
where,ExonidFilter,EnsDb,character-method	GeneidFilter-class
where,ExonidFilter,EnsDb,missing-method	GeneidFilter-class
where,ExonidFilter,missing,missing-method	GeneidFilter-class
where,ExonrankFilter,EnsDb,character-method	GeneidFilter-class
where,ExonrankFilter,EnsDb,missing-method	GeneidFilter-class
where,ExonrankFilter,missing,missing-method	GeneidFilter-class
where,GenebiotypeFilter,EnsDb,character-method	GeneidFilter-class
where,GenebiotypeFilter,EnsDb,missing-method	GeneidFilter-class
where,GenebiotypeFilter,missing,missing-method	GeneidFilter-class
where,GeneidFilter,EnsDb,character-method	GeneidFilter-class
where,GeneidFilter,EnsDb,missing-method	GeneidFilter-class
where,GeneidFilter,missing,missing-method	GeneidFilter-class
where,GenenameFilter,EnsDb,character-method	GeneidFilter-class
where,GenenameFilter,EnsDb,missing-method	GeneidFilter-class
where,GenenameFilter,missing,missing-method	GeneidFilter-class
where,GRangesFilter,EnsDb,character-method	GeneidFilter-class
where,GRangesFilter,EnsDb,missing-method	GeneidFilter-class
where,GRangesFilter,missing,missing-method	GeneidFilter-class
where,list,EnsDb,character-method	GeneidFilter-class
where,list,EnsDb,missing-method	GeneidFilter-class
where,list,missing,missing-method	GeneidFilter-class
where,SeqendFilter,EnsDb,character-method	GeneidFilter-class
where,SeqendFilter,EnsDb,missing-method	GeneidFilter-class
where,SeqendFilter,missing,missing-method	GeneidFilter-class
where,SeqnameFilter,EnsDb,character-method	GeneidFilter-class
where,SeqnameFilter,EnsDb,missing-method	GeneidFilter-class
where,SeqnameFilter,missing,missing-method	GeneidFilter-class
where,SeqstartFilter,EnsDb,character-method	GeneidFilter-class
where,SeqstartFilter,EnsDb,missing-method	GeneidFilter-class
where,SeqstartFilter,missing,missing-method	GeneidFilter-class
where,SeqstrandFilter,EnsDb,character-method	GeneidFilter-class
where,SeqstrandFilter,EnsDb,missing-method	GeneidFilter-class
where,SeqstrandFilter,missing,missing-method	GeneidFilter-class
where,TxbiotypeFilter,EnsDb,character-method	GeneidFilter-class
where,TxbiotypeFilter,EnsDb,missing-method	GeneidFilter-class
where,TxbiotypeFilter,missing,missing-method	GeneidFilter-class
where,TxidFilter,EnsDb,character-method	GeneidFilter-class
where,TxidFilter,EnsDb,missing-method	GeneidFilter-class
where,TxidFilter,missing,missing-method	GeneidFilter-class
