Functions to perform cancer outlier profile analysis.


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Documentation for package ‘copa’ version 1.40.0

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copa-package copa - A package to compute 'Cancer Outlier Profile Analysis'
copa Calculate COPA Scores from a Set of Microarrays
copaPerm Measure Significance of COPA by Permutation
plotCopa Plot Gene Pairs fom the Results of Running copa
scatterPlotCopa Create scatterplots of interesting gene pairs
summaryCopa Create Summary Showing Top Gene Pairs
tableCopa Summarize copa results