SISPA: Method for Sample Integrated Set Profile Analysis


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Documentation for package ‘SISPA’ version 1.2.1

Help Pages

callGSVA GSVA enrichment analysis
callZSCORE Row ZSCORES
cptSamples Sample profile identifier analysis
expression_data An example of RNAseq derived gene expression data
freqplot A plotting function for SISPA sample identifiers
gene_list an example file containing the list of input genes
SISPA SISPA
sortData Sorts the data by a column
variant_data An example of RNAseq derived gene variant change data
variant_list an example file containing the list of input genes variants
waterfallplot A plotting function for SISPA sample identifiers