# RImmPort: Enabling Ready-for-analysis Immunology Research Data

## Documentation for package ‘RImmPort’ version 1.0.2

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

RImmPort-package | RImmPort: Enabling ready-for-analysis immunology research data
Adverse Events Domain | Adverse Events Domain
AE | Adverse Events Domain Variables
APMH | Associated Persons Medical History Domain Variables
Associated Persons Medical History Domain | Associated Persons Medical History Domain
buildNewSqliteDb | buildNewSqliteDb
Cellular Quantification Domain | Cellular Quantification Domain
CM | Concomitant Medications Domain Variables
Concomitant Medications Domain | Concomitant Medications Domain
Demographics Domain | Demographics Domain
DM | Demographics Domain Variables
DV | Protocol Deviations Domain Variables
Events | Events class
Events-class | Events class
EX | Exposure Domain Variables
Exposure Domain | Exposure Domain
FA | Findings About Domain Variables
Findings | Findings class
Findings About Domain | Findings About Domain
Findings-class | Findings class
Genetics Findings Domain | Genetics Findings Domain
getAssayDataOfStudies | Get specific assay data of one or more studies from the ImmPort database
getDomainCode | Get code of a specific domain
getDomainDataOfStudies | Get specific domain data of one or more studies from the ImmPort database
getListOfAssayTypes | Get a list of Assay Types
getListOfDomains | Get names of all domains and their codes
getListOfStudies | Get a list of all studies
getStudiesWithSpecificAssayData | Get a list of studies that have specific assay type data
getStudiesWithSpecificDomainData | Get a list of studies that have specific domain data
getStudy | Get all data of a specific study from the ImmPort data source
Interventions | Interventions class
Interventions-class | Interventions class
Laboratory Test Results Domain | Laboratory Test Results Domain
LB | Laboratory Test Results Domain Variables
loadSerializedStudyData | Load the Serialized Data of a Study
Medical History Domain | Medical History Domain
mergeDomainAndSupplemental | Merge the Domain dataframe and Supplemental dataframe (long form)
MH | Medical History Domain Variables
Nucleic Acid Quantification Domain | Nucleic Acid Quantification Domain
PE | Physical Examination Domain Variables
PF | Genetics Findings Domain Variables
Physical Examination Domain | Physical Examination Domain
Protein Quantification Domain | Protein Quantification Domain
Protocol Deviations Domain | Protocol Deviations Domain
QS | Questionnaires Domain Variables
Questionnaires Domain | Questionnaires Domain
RImmPort | RImmPort: Enabling ready-for-analysis immunology research data
serialzeStudyData | Serialize the Study Data
setImmPortDataSource | Set ImmPort data ource
Skin Response Domain | Skin Response Domain
SpecialPurpose | Special Purpose class
SpecialPurpose-class | Special Purpose class
SR | Skin Response Domain Variables
Study | Study class
Study-class | Study class
SU | Substance Use Domain Variables
Subject Visits Domain | Subject Visits Domain
Substance Use Domain | Substance Use Domain
SUPP | Supplemental Variables
SUPPDV | Protocol Deviations Domain Supplemental Variables
SUPPFA | Findings About Domain Supplemental Variables
SUPPLB | Laboratory Test Results Domain Supplemental Variables
SUPPMH | Medical History Domain Supplemental Variables
SUPPPE | Physical Examination Domain Supplemental Variables
SUPPPF | Genetics Findings Domain Supplemental Variables
SUPPVS | Vital Signs Domain Supplemental Variables
SUPPZA | Protein Quantification Domain Supplemental Variables
SUPPZB | Cellular Quantification Domain Supplemental Variables
SUPPZC | Nucleic Acid Quantification Domain Supplemental Variables
SUPPZD | Titer Assay Results Domain Supplemental Variables
SV | Subject Visits Domain Variables
TA | Trial Arms Domain Variables
TI | Trial Inclusion Exclusion Criteria Domain Variables
Titer Assay Results Domain | Titer Assay Results Domain
Trial Arms Domain | Trial Arms Domain
Trial Inclusion Exclusion Criteria Domain | Trial Inclusion Exclusion Criteria Domain
Trial Summary Domain | Trial Summary Domain
TrialDesign | Trial Design class
TrialDesign-class | Trial Design class
TS | Trial Summary Domain Variables
Vital Signs Domain | Vital Signs Domain
VS | Vital Signs Domain Variables
ZA | Protein Quantification Domain Variables
ZB | Cellular Quantification Domain Variables
ZC | Nucleic Acid Quantification Domain Variables
ZD | Titer Assay Results Domain Variables