1a81404985d8005c911bd4366c0d157d *DESCRIPTION
9708f57f74b8f48c2d8cee079d34bc62 *NAMESPACE
d99c74a05b6ee2fbd173b3cd062cd6c9 *NEWS
406cc3d6bb1024316627e1b327a08df7 *R/IMGT-c_region-utils.R
fad7eaa51cc2a415d51d580900c5c21f *R/IMGT-utils.R
0cdd5580bc0b9af5b8bfc778b9bba334 *R/J_alleles-inspect.R
95f1d3afb9991eede158de5974c93408 *R/LATIN_NAMES.R
ca3d45a4306064148a6122a8fd893be3 *R/OAS-utils.R
35fd0603b86dac41628df8bf7272284f *R/OGRDB-API.R
ebbd63da22fc83f2d35bc9391d01cee7 *R/OGRDB-utils.R
3e192df4f73e92d39b00fae0bbc2d3f7 *R/V_alleles-inspect.R
7db70bfdd6b3e6d902ca5402d23e4a5a *R/allele2gene.R
de8584d4f18f6f8bd53637ad2b74e4f5 *R/augment_germline_db.R
e8f2cb18f7ae6005757a6eb326c09328 *R/auxdata-IO.R
700f9348a84660cea35e7b5dba8ba772 *R/auxdata-utils.R
cfa87e563a18d745eea1aeaee49b8b18 *R/cache-utils.R
69a934a57c9381869f5241ebf2d27c95 *R/clean_allele_set.R
f6f3313887df667f0904927ec12213e5 *R/combine_germline_dbs.R
6d514c47c4cd525358ef7d2ec6173d40 *R/compute_V_gene_delineations.R
ceee759b2e9d86126f9646c730de641e *R/compute_auxdata.R
d3c693f21ea8232ba30aef9efc564324 *R/create_c_region_db.R
5e40f3f5fd9d7cedbc2cced6585dc58d *R/create_germline_db.R
f9155eb9c8b2eb54b79965ac7a8d820f *R/create_region_db.R
f0bd8fda57fd198adad648a1e68f4045 *R/db-utils.R
4d1cb1e15784bf8dd1817668e2dbb7b4 *R/download_IMGT_germline_sequences.R
2ea2fd593aaa24eae7cce2a331f0da6d *R/download_OGRDB_germline_json.R
a570704835751728784f392e1c90116f *R/download_OGRDB_germline_sequences.R
e147f4e0c5279c616ea721909425ccc7 *R/edit_imgt_file.R
a64e7b2b5b68526b30e543f60492c16c *R/file-utils.R
f82ab73f18a5cfbd886bfb28c60edaf6 *R/get_igblast_root.R
dfd4c4e798851acd99bf681d87e83b91 *R/igblast_info.R
f334b2bf9c35202a0d88c41793c27f86 *R/igblastn.R
c3a7d3de771d19ef74c44218ace40b35 *R/igbrowser.R
6acbc758f97c0a25256522495b309f81 *R/igdata-IO.R
d0eeb0afd97bf979957f2fb2d3cd857c *R/install_IMGT_germline_db.R
7d55cacf492d31545bf5072297e2d0a2 *R/install_OGRDB_germline_db.R
a6a22d4efbea44716cc12178a11ad9ac *R/install_custom_germline_db.R
81a418c61405c9c2abd974fca8adbfdb *R/install_igblast.R
b34d98657735fe97d9f6b105d52de588 *R/intdata-utils.R
7676ee1a37071d2eaafdc95103b9fa1c *R/internet-utils.R
7ce53d12f86d32aecf81b493fed0bc30 *R/list_c_region_dbs.R
6124172367c4ffe602745979e4e84a71 *R/list_germline_dbs.R
177162ea3e40c1599c1fa5298c9355f2 *R/loci-utils.R
9635457ed0d1619f097a8c339a777720 *R/long_to_wide_airr.R
dad367aca33b5dce22b34824027b308f *R/make_blastdbs.R
980f90a0c66dc7d9e87a354373e18fa3 *R/ndm_data-IO.R
aa735034b187937b6ccb67002cdf6c53 *R/parse_imgt_fasta_headers.R
6b30e2fe0914f45078f60259c4f72d09 *R/percent_mutation.R
63305576641fbdc1a201e4cdd4f597eb *R/precompiled-igblast-utils.R
e2f4b26aa98461cdc235ce8c69a5cb27 *R/prepare_igblastn_cmdline_args.R
6eb4cf84dce49438446c6c1f1b8da659 *R/read_igblastn_AIRR_output.R
f64cd3ead49e8bf1edfe8f2a8b399741 *R/read_igblastn_fmt7_output.R
9a0b51c3cda0842aaa7648b813d08547 *R/reset_c_region_dbs.R
bbd1b7c252a987fa8d66bf2366e41553 *R/reset_germline_dbs.R
d9d635c1cec56b070e8bdddbe4106ff0 *R/summarizeMismatches.R
f7eef80bc8f6042194d8242ffe3da8ab *R/translate_codons.R
4faf2a9c43857f67a87d3fd11e42b100 *R/update_live_igdata.R
649cfc4934bab9edd5cd70fb9bb0a0dd *R/use_c_region_db.R
b571027a85315724cea2d4f9c2817b1e *R/use_germline_db.R
02c6c8d765a84b79f01b3823a8ebb4bb *R/utils.R
c54fb096fd5edcd53603dc79edac4176 *R/zzz.R
a9b26905822e7271e83ec9b64145cb9a *README.md
4e82f39702d7ceca304f278fce28f688 *TODO
92ded9c42abc7238220acdf789b7790d *build/vignette.rds
a330c1a5849c1b63131feb45c6824ef1 *inst/CITATION
ab7064043cbe0afbe0502a2d2ebf7036 *inst/doc/igblastr_overview.R
c307791531a58f54b344e7c2fff71ddd *inst/doc/igblastr_overview.Rmd
29b9ce25a34a35301a2228f84935e272 *inst/doc/igblastr_overview.html
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447233d85fb6925d77176e821a74beda *inst/extdata/BCR/README.txt
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2b1d8f65644a053c197ea7c2fa664d24 *inst/extdata/README.txt
c8eb3c7504a908eb0df2eeb24c80843e *inst/extdata/TCR/README.txt
86840d84ec6545013cadc5728bfe31e8 *inst/extdata/TCR/SRR11341217.fasta.gz
8cf366cf21f7edb4a12ddf32e2670946 *inst/extdata/constant_regions/IMGT/README.txt
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8b909050c0ab3ab600aa3f5d40132e01 *inst/extdata/constant_regions/IMGT/human/TR/version
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