ec65ef5ec7f8998b801d618f01a68d5f *DESCRIPTION
60ab37f1d56d0368749c5d3abd2f66c4 *NAMESPACE
7d3c2dfa4ed88be13ecb61f17ab71f38 *NEWS
7b34e74bec157b060f9abd87e2b9baf4 *R/DRIMSeq.R
b7cc0cacb2f30b0096521ccebaf6e915 *R/aaa.R
4f7778b678d90489b198289ad508c852 *R/class_MatrixList.R
ad3f5dfdafb9ae3758e419d9e1a1e953 *R/class_dmDSdata.R
02a6a49dcc8e2f7bd29dd9eac1f5e296 *R/class_dmDSfit.R
6c7d8d9530e6e5ce7c41af4e4e4daf04 *R/class_dmDSprecision.R
49f41e6a88ddb22e6245c8a4cd61376d *R/class_dmDStest.R
631e7e8bc761f24aa8676389a57494d1 *R/class_dmSQTLdata.R
b5e9544743bf4bf43a8761b6838ea146 *R/class_dmSQTLfit.R
b5ab02d9052cda16e93ea259fc88f136 *R/class_dmSQTLprecision.R
301697c5646a2e5aced284878c5671f9 *R/class_dmSQTLtest.R
ef9a90d57e9220a04f53ac2b67dbbcff *R/class_show_utils.R
3dec5c07ab5fb370cc5d6b6f3c41216c *R/dmDS_CRadjustment.R
50b75fcab6150e7f6175e51eb9ddf023 *R/dmDS_estimateCommonPrecision.R
6d01dcdf92c2280f385962eb078e46f3 *R/dmDS_estimateTagwisePrecision.R
4061b6effc8733b4836c44b66a62ac6e *R/dmDS_filter.R
00ffd84a822f1a66ecedb3c73dd61428 *R/dmDS_fit.R
854b8bfdbdf95214d8648962a65eb260 *R/dmDS_profileLik.R
233b916bb66be5b89e0572e0a9593fdd *R/dmSQTL_CRadjustment.R
4fb514aee35d102677df95959b4b06b1 *R/dmSQTL_estimateCommonPrecision.R
b14b1cf79292c55021ae1c4242058148 *R/dmSQTL_estimateTagwisePrecision.R
d6da8b7d364caf06b0b578555fbed146 *R/dmSQTL_filter.R
e98c6422d72246538b2b9053aa40d8ae *R/dmSQTL_fit.R
f81b1244c47c171718b839d57cd59d53 *R/dmSQTL_permutations.R
e495df0f854b5b70559618ecdb35f387 *R/dmSQTL_profileLik.R
6be86b7a2e991c65c442ca79e2463a8d *R/dm_CRadjustmentManyGroups.R
cf9b9cc22e1ef1c0935a96f8f6d63771 *R/dm_CRadjustmentOneGroup.R
091f98644092f1544e888225ad4d86b3 *R/dm_CRadjustmentRegression.R
ba125d1bc261ba4b53360f0154b1eaca *R/dm_LRT.R
e7672f4839330055becc6851269df5ea *R/dm_core_Hessian.R
55d426df69a8aad2a987627cd7f82d8d *R/dm_core_colorb.R
aa3c2cbc1ad0950792cfe6573984221d *R/dm_core_deviance.R
f3ea68655c1e326e028724d17ebebc67 *R/dm_core_lik.R
0860610995bbc54e044a15ce1255715d *R/dm_core_score.R
c738cf0bd27a0a5c5324fcdd9d4f0ca0 *R/dm_estimateMeanExpression.R
9e2406be3bcfb58c78fc1f8477aaaa2f *R/dm_fitManyGroups.R
4f84eb0b7d527537b86ea1f75f21a0a3 *R/dm_fitOneGroup.R
ef105ba6d44dd5360da4a7ae9f80164f *R/dm_fitRegression.R
5f360509c40783318c212b5563190c01 *R/dm_plotData.R
792e91c762d0f103ab581151ee91a467 *R/dm_plotPrecision.R
582d746911fe03bffb869d8e754c383a *R/dm_plotProportions.R
69674880adefac45b928ecc0e7047d01 *R/dm_plotPvalues.R
5e4a0f8823ec8116c4293760925e8f99 *R/dm_profileLikModeration.R
49a70d17a95eceed2e42d4dd970e2a63 *README.md
5671a9e216e6e43374df84487accc66e *build/vignette.rds
c04e7804b9fbc76d39fe8d03938e867f *inst/CITATION
8a5f71de235deb014168a1b72db473f7 *inst/doc/DRIMSeq.R
e6e015e3e6e1dcebd06c0f4193366f1a *inst/doc/DRIMSeq.Rnw
1c2884d2cd132e25a08053fcf6dc7eb5 *inst/doc/DRIMSeq.pdf
7cc16a0e0f38a412fce342761870866b *man/MatrixList-class.Rd
4b9e24e088b033af2f8e13a94d750995 *man/dmDSdata-class.Rd
11ce755147faa1eae20e1e9fdccac2f3 *man/dmDSdata.Rd
ca00d00a97a9d7753610f0ba4561a680 *man/dmDSfit-class.Rd
39d91a48676c1a6f052f542d796503b2 *man/dmDSprecision-class.Rd
59b6961cabd3a47d31313ee699500109 *man/dmDStest-class.Rd
1f895e4a759c09e8a1091f7449aca62d *man/dmFilter.Rd
21dc777abfee183b778710f0fd016abd *man/dmFit.Rd
a82bf8878a708bd4e132545f7654ff4a *man/dmPrecision.Rd
80f8b4f80be88d735f8ec0ef81ec4f1a *man/dmSQTLdata-class.Rd
be324499b0afeb2f018af001aced2529 *man/dmSQTLdata.Rd
b9f07f98f2bcd42eac957619178c5dc5 *man/dmSQTLfit-class.Rd
7241167ce8b444ed70a7ccfc41823302 *man/dmSQTLprecision-class.Rd
2c743ecd90209c88559a6fb100b7e1bb *man/dmSQTLtest-class.Rd
b8574621a3872d0077fb80072d1188dc *man/dmTest.Rd
5b8e6bb608cb55ba07a78e7b65d41778 *man/dm_plotDataDSInfo.Rd
c471124ca101ae4e462f8cb5f787fd03 *man/dm_plotProportions.Rd
8634efabf874c8fbc905b810148f2a21 *man/plotData.Rd
afea8d58c16edea52415f95ce29b4f77 *man/plotPValues.Rd
2d1c005839fd2bd199fa575349a939a6 *man/plotPrecision.Rd
f360fbe25854f3805531fc175a6090d7 *man/plotProportions.Rd
7dc776b3e4165d707e3fc81151b9164f *tests/testthat.R
a506cc02e276837e39ffae9dfa580cde *tests/testthat/test_MatrixList.R
7b3b9b6715a0b7ba12c4a7a3cd03f83e *tests/testthat/test_dm_adjustment.R
196c0973cd01e70d7a0c1cea3c20c222 *tests/testthat/test_gene_filter.R
c98ed71e800c41126d5b98c8d367d2aa *tests/testthat/test_lik_score.R
337e9b8a0487f6bb392c003802ca9a48 *tests/testthat/test_total_switch.R
e6e015e3e6e1dcebd06c0f4193366f1a *vignettes/DRIMSeq.Rnw
4d51b6c2d60e8d7e9abb93725b2c5824 *vignettes/References.bib
