# Generated by roxygen2: do not edit by hand

export(clusterSim)
export(doSim)
export(doseInterpretResult)
export(doseSim)
export(enrichDO)
export(enrichNCG)
export(evidence)
export(explainDisease)
export(facet_grid)
export(gene2DO)
export(geneSim)
export(get_organism)
export(gseDO)
export(gseNCG)
export(interpretDisease)
export(mclusterSim)
export(rankMouseModels)
export(set_auto_update)
export(simplot)
export(theme_dose)
exportClasses(doseInterpretResult)
exportMethods(as.data.frame)
exportMethods(evidence)
exportMethods(show)
exportMethods(summary)
importClassesFrom(GOSemSim,GOSemSimDATA)
importClassesFrom(enrichit,enrichResult)
importClassesFrom(enrichit,gseaResult)
importFrom(GOSemSim,
  combineScores,
  get_organism,
  set_auto_update,
  termSim
)
importFrom(enrichit,
  gsea_gson,
  ora_gson,
  setReadable
)
importFrom(ggplot2,
  aes,
  element_blank,
  element_text,
  facet_grid,
  geom_text,
  geom_tile,
  ggplot,
  margin,
  scale_fill_gradient,
  scale_x_discrete,
  scale_y_discrete,
  theme,
  theme_bw,
  xlab,
  ylab
)
importFrom(memoise,memoise)
importFrom(methods,
  is,
  new,
  show
)
importFrom(reshape2,melt)
importFrom(utils,stack)
importFrom(yulab.utils,
  load_OrgDb,
  yulab_msg
)
importMethodsFrom(AnnotationDbi,exists)
importMethodsFrom(AnnotationDbi,get)
importMethodsFrom(AnnotationDbi,toTable)
