AINet                   AINet
ActivationGate          ActivationGate
ClassSwitcher           ClassSwitcher
ConvergentSelector      ConvergentSelector
GerminalCenter          GerminalCenter
IdiotypicNetwork        IdiotypicNetwork
ImmuneAlgorithm         ImmuneAlgorithm
ImmuneRepertoire        ImmuneRepertoire
MemoryPool              MemoryPool
Microenvironment        Microenvironment
SHMEngine               SHMEngine
VDJLibrary              VDJLibrary
bHIVE                   bHIVE: B-cell Hybrid Immune Variant Engine
bHIVEParam              bHIVE clustering through bluster
bHIVEmodel              bHIVE classification model for caret
honeycombHIVE           honeycombHIVE: Multilayer AIS with optional
                        gradient-based fine-tuning
honeycombHIVEmodel      Multilayered honeycombHIVE classification model
                        for caret
refineB                 refineB: Gradient-based fine-tuning for bHIVE
                        antibodies with multiple loss functions and
                        optimizers
swarmbHIVE              Tune Hyperparameters for bHIVE (Swarm/Grid
                        Search)
visualizeHIVE           Visualize bHIVE/honeycombHIVE Results
