scRepertoire-package	scRepertoire-package
._bind_contig_list	dot-_bind_contig_list
._split_and_pad	dot-_split_and_pad
addVariable	addVariable
alluvialClones	alluvialClones
annotateInvariant	annotateInvariant
clonalAbundance	clonalAbundance
clonalBias	clonalBias
clonalBin	clonalBin
clonalCluster	clonalCluster
clonalCompare	clonalCompare
clonalDiversity	clonalDiversity
clonalHomeostasis	clonalHomeostasis
clonalLength	clonalLength
clonalNetwork	clonalNetwork
clonalOccupy	clonalOccupy
clonalOverlap	clonalOverlap
clonalOverlay	clonalOverlay
clonalProportion	clonalProportion
clonalQuant	clonalQuant
clonalRarefaction	clonalRarefaction
clonalScatter	clonalScatter
clonalSizeDistribution	clonalSizeDistribution
combineBCR	combineBCR
combineExpression	combineExpression
combineTCR	combineTCR
contig_list	contig_list
createHTOContigList	createHTOContigList
exportClones	exportClones
expression2List	expression2List
getCirclize	getCirclize
getContigDoublets	getContigDoublets
getHumanIgPseudoGenes	getHumanIgPseudoGenes
highlightClones	highlightClones
loadContigs	loadContigs
percentAA	percentAA
percentGenes	percentGeneUsage
percentGeneUsage	percentGeneUsage
percentKmer	percentKmer
percentVJ	percentGeneUsage
positionalEntropy	positionalEntropy
positionalProperty	positionalProperty
quietBCRgenes	quietVDJgenes
quietBCRgenes.default	quietVDJgenes
quietBCRgenes.Seurat	quietVDJgenes
quietTCRgenes	quietVDJgenes
quietTCRgenes.default	quietVDJgenes
quietTCRgenes.Seurat	quietVDJgenes
quietVDJgenes	quietVDJgenes
scRepertoire	scRepertoire-package
scRep_example	scRep_example
StartracDiversity	StartracDiversity
subsetClones	subsetClones
vizCirclize	vizCirclize
vizGenes	percentGeneUsage
