# Vignettes and other documentation

## Vignettes from package 'igvR'

igvR::v00.basicIntro |  | "Introduction: a simple demo" | HTML | source | R code
igvR::v01.stockGenome |  | "Use a Stock Genome" | HTML | source | R code
igvR::v02.customGenome |  | "Use a Custom Genome" | HTML | source | R code
igvR::v03.ctcfChIP |  | "Explore CTCF ChIP-seq alignments, MACS2 narrowPeaks, Motif Matching and H3K4me3 methylation" | HTML | source | R code
igvR::v04.pairedEnd |  | "Paired-end Interaction Tracks" | HTML | source | R code
igvR::v05.ucscTableBrowser |  | "Obtain and Display H3K4Me3 K562 track from UCSC table browser" | HTML | source | R code
igvR::v06.annotationHub |  | "Obtain and Display H3K27ac K562 track from the AnnotationHub" | HTML | source | R code
igvR::v07.gwas |  | "GWAS Tracks" | HTML | source | R code
igvR::v08.cram |  | "Visualizing CRAM Alignments" | HTML | source | R code