classifyLACHESIS	classifyLACHESIS
clonalMutationCounter	clonalMutationCounter
estimateClonality	estimateClonality
estimateMutationRate	estimateMutationRate
LACHESIS	LACHESIS
MRCA	MRCA
nbImport	nbImport
normalizeCounts	normalizeCounts
plotClinicalCorrelations	plotClinicalCorrelations
plotClonality	plotClonality
plotDiseaseTrajectories	plotDiseaseTrajectories
plotLachesis	plotLachesis
plotMutationDensities	plotMutationDensities
plotNB	plotNB
plotSurvival	plotSurvival
plotVAFdistr	plotVAFdistr
readCNV	readCNV
readVCF	readVCF
